Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916966.1_cds_XP_016466625.1_59459
CDS Infomation

[gene=LOC107789344] [db_xref=GeneID:107789344] [protein=eukaryotic translation initiation factor 2D-like isoform X2] [protein_id=XP_016466625.1] [location=join(29784..29918,30110..30221,31318..31508,31591..31685,31766..32188,33236..33344,34305..34950,36150..36271)] [gbkey=CDS]
Sequence

ATGTTCAAGAAGGCAGTGGACGCCAAGTCTCACCAGCGACTTTCCGGCGCCGACCGTAAG
AAGATCCGTCGCACTATCAGAGACCGTTTCCCTAATTCCACTGATGCCTTTCTCGACCTT
TTACTTCCTCCCAAGGCGGAGTTAAATGTTTCGAAATATCCAAATCGAGTACTCGTATAT
GGTTTGGAGGGTGATTGCCCAATGTTTTTTGACGTAGATGGGCGAGGTCGTGATATATTC
CCTACAGTTTATGCTCTGTGGAAAGTCCCAGAACTTTTGCCTGCTTTTGTGCTGAAAGGG
GGTGAAGTTTCTCATTTTATTCTCGGAGGGGCAGATTTAATGTTCCCCGGCATCAGTATA
CCTCCTGAAGGGTTTCCATCATTTTCTGCTGGGGAGCCATGGGCAGTAAAGGTTCCTGGA
AACCCTGCCGCAATAGCTGTGGGAACAACTACCATGAGTAGCACAGAGGCTATAAAAGCT
GGTCTACGTGGAAAGGCTTTAAAAATATGTCATTACTATCGAGACACCCTTTGGGAAGCC
GCTGAAAATTGTCATGTACCAAATGCTGGTTTTCTAGAAGACGTCGTGTTTGAAGATCCT
GCTCTATCATTGAGTAGTAGGGCATCTGATTCAAGTGAAGTTGATCCGTCAGTTGAGCCA
GGAAATGTGACTAACAATGAAGACACCGGAGAAGTGATTGATCCTGATGTTACTTCATCA
GGTGTTGGTCATCCTTGTACCACACAGAGTGATGGATCAGATGAAGTCAGTGTGCAGCTT
ATCAATGATCTAGGCGAGTTGAAGATTGCAGAAACTCCTGTAAATGAATCAAATAATGAG
GGACAACATCCCTTGTCTGTTGAAGAGGTAGATGCACTCTTGGACAAGTGCCTTCTTCAA
GCATTACATACGACAATTAAGGAAAAAGATCTGCCCATCCCTGGAAGTACATTATGGTCA
AATCACGTGCTACCTTGCAGGCCTCCAGGCATAACACTCGACATAAAGAAGTCATCTCAC
AAGAAATTATCCAAGTGGCTACAGGCTAAAGCCTCTGGCGGATTGATCTCACTGAAAGAA
GATAAGCATAAGAAAGAGGTGATTCTTGTTTCTGTTAATCAAAAGCATCCAGACTACTTG
TCCTTCAAGCCAGAAAAGAAAAAAGTGGACGACACTGGGCCCTCAATAAATCATGCTTCT
AATGAAGAACAGCTGCAGAAGACACTGGAAGTTTCTGAAATTTATAAACCAAGCGTGCAT
GTAAATCCTATTTTTGCTTCTGTTGGTGCTGACACCAGAAGACTTTTCACTGCATCTGAA
GCCTCTGAAATAGTGTTCCAGTACGTTGAGAAAGAAAATCTTGTCAAGCCATCAAATAAG
TCCATTGTGACGTTGGATGCAATTCTATGTGATGCTTTATTTAAGGGAGCCATAAAAAAG
GGAACGACTTATCCAACAGAAATTCATAAGAAGGATTTGGGACAAACTTTCATAGGTAGG
ATGCAAGCCCATCATTGCGTGACTCGAGGTAACGATACAGCTGTTCGCAAAGGTGCCTTG
AAACCCATCCAGATAATGACAGAACGGAGGCAAGGAAACAAAAAAATGACTAAACTTTCT
GGAATTGAGTCATTTCTGTTGGATGCAGAGGCTTTGGCTTCAGAGTTGCAGAAGAAGTTT
GCCTGTAGCACTACTGTGGCAGAACTTCCAGGTAAGAAAGGACAGGAAGTTTTGGTTCAA
GGAGGTGTTATTGATGATCTTGCAAGATATCTTGTTGAGCAGTATGGTGTCCCAAAAAGA
TATATTGAAGTGCTTGATAAAACAAAGAGGTGA

Peptide Sequence

PEP ID

XP_016466625.1
PEP Infomation

PREDICTED: eukaryotic translation initiation factor 2D-like isoform X2 [Nicotiana tabacum]
Sequence

MFKKAVDAKSHQRLSGADRKKIRRTIRDRFPNSTDAFLDLLLPPKAELNVSKYPNRVLVY
GLEGDCPMFFDVDGRGRDIFPTVYALWKVPELLPAFVLKGGEVSHFILGGADLMFPGISI
PPEGFPSFSAGEPWAVKVPGNPAAIAVGTTTMSSTEAIKAGLRGKALKICHYYRDTLWEA
AENCHVPNAGFLEDVVFEDPALSLSSRASDSSEVDPSVEPGNVTNNEDTGEVIDPDVTSS
GVGHPCTTQSDGSDEVSVQLINDLGELKIAETPVNESNNEGQHPLSVEEVDALLDKCLLQ
ALHTTIKEKDLPIPGSTLWSNHVLPCRPPGITLDIKKSSHKKLSKWLQAKASGGLISLKE
DKHKKEVILVSVNQKHPDYLSFKPEKKKVDDTGPSINHASNEEQLQKTLEVSEIYKPSVH
VNPIFASVGADTRRLFTASEASEIVFQYVEKENLVKPSNKSIVTLDAILCDALFKGAIKK
GTTYPTEIHKKDLGQTFIGRMQAHHCVTRGNDTAVRKGALKPIQIMTERRQGNKKMTKLS
GIESFLLDAEALASELQKKFACSTTVAELPGKKGQEVLVQGGVIDDLARYLVEQYGVPKR
YIEVLDKTKR

Transcript Sequence

Gene sequence data has not been registered.